Steven Shelikoff wrote:

IOW, even if the pump is past the filter drawing fuel through it, the
filter is still in "pressure" mode because it's really the atmospheric
pressure pushing fuel through the filter.

The difference is that if the pump suction pulls water and
fuel directly from the tank it will do an excellent job of
mixing it up to form an emulsion that will not filter out
very effectively.

The path should be, a basket strainer to catch the chunks, a
separarator/filter to eliminate the bulk of the water and
the smaller suspended particles, the pump, then the finer
stages of filtration.

This is all assuming you don't have access to a centrifuge
which is really the best way to handle the process.

Rick